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301185 VO Structural Bioinformatics I (2019W)
Labels
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Details
Language: English
Examination dates
Lecturers
Classes (iCal) - next class is marked with N
Preliminary meeting with the students: Seminar Room VBC 5
Friday, October 11, 11-12
Mo 13 January 10-12, 13-16
Tu 14 January 10-12, 13-16
We 15 January 10-12, 13-16
Th 16 January 10-12, 13-16
Fr 17 January 10-12, 13-16Exams:
Take an appointment
Friday
11.10.
11:00 - 12:00
STB/Seminarraum Strukturchemie Campus Vienna Biocenter 5, 1030 Wien
(Kickoff Class)
Monday
13.01.
10:00 - 12:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Monday
13.01.
13:00 - 16:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Tuesday
14.01.
10:00 - 12:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Tuesday
14.01.
13:00 - 16:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Wednesday
15.01.
10:00 - 12:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Wednesday
15.01.
13:00 - 16:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Thursday
16.01.
10:00 - 12:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Thursday
16.01.
13:00 - 16:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Friday
17.01.
10:00 - 12:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Friday
17.01.
13:00 - 16:00
STB/EDV-Raum Campus Vienna Biocenter, 1030 Wien
Information
Aims, contents and method of the course
Programme Introduction to the molecular graphics and analysis of the most common protein folds with RasMol, Pymol and Chimera. Measurements of structural similarity between proteins, theory and applications (Dalilite, CE, PDBeFold and other tools). Databases of macromolecular structures: the Protein Data Bank, the wwPDB and the ePDB. Databases of structural domains: CATH, SCOP, and SCOP2. Databases of protein domains: Pfam, InterPro, InterProScan. Databases of computational models: ModBase and BioModels. Validation of experimental macromolecular structures. The problem of data redundancy.
Assessment and permitted materials
Written exam
Minimum requirements and assessment criteria
Examination topics
Reading list
Association in the course directory
MMB II-2, MMB W-2, MGE III-2, MMEI III, M-WZB, PhD MB 1,UF MA BU 01, UF MA BU 04
Last modified: Mo 07.09.2020 15:22