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301185 VO Structural Bioinformatics I (2020W)

3.00 ECTS (2.00 SWS), SPL 30 - Biologie

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Details

Language: English

Examination dates

Lecturers

Classes (iCal) - next class is marked with N

see german version

Monday 11.01. 10:00 - 16:00 Digital
Tuesday 12.01. 10:00 - 16:00 Digital
Wednesday 13.01. 10:00 - 16:00 Digital
Thursday 14.01. 10:00 - 16:00 Digital
Friday 15.01. 10:00 - 16:00 Digital

Information

Aims, contents and method of the course

Programme Introduction to the molecular graphics and analysis of the most common protein folds with RasMol, Pymol and Chimera. Measurements of structural similarity between proteins, theory and applications (Dalilite, CE, PDBeFold and other tools). Databases of macromolecular structures: the Protein Data Bank, the wwPDB and the ePDB. Databases of structural domains: CATH, SCOP, and SCOP2. Databases of protein domains: Pfam, InterPro, InterProScan. Databases of computational models: ModBase and BioModels. Validation of experimental macromolecular structures. The problem of data redundancy.

Assessment and permitted materials

Written exam

Minimum requirements and assessment criteria

Examination topics

Reading list


Association in the course directory

MMB II-2, MMB W-2, MGE III-2, MMEI III, M-WZB, PhD MB 1,UF MA BU 01, UF MA BU 04

Last modified: We 30.06.2021 10:29