270275 VO Computer Simulation of Biopolymeres (2024S)
Labels
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Details
Language: German
Examination dates
Lecturers
Classes (iCal) - next class is marked with N
Most likely, there won't be lecture on March 20.
I want the set exam dates (held digitally) in accord with your wishes. My plan (plus/minus a few days):Juni 19, 2024Juli 15, 2024
September 17, 2024
Mid-December 2024 or Mid-January(2025)
Wednesday
06.03.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
13.03.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
20.03.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
10.04.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
17.04.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
24.04.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
N
Wednesday
08.05.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
15.05.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
22.05.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
29.05.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Wednesday
05.06.
13:15 - 14:45
Hörsaal 4 Chemie HP Währinger Straße 42
Information
Aims, contents and method of the course
Assessment and permitted materials
Digital written exam with questions for download (open book, but a fixed time window)Four dates will be offered, tentively
June 15, 2022
July 11, 2022
Sep 15, 2022
and mid-December 2022
June 15, 2022
July 11, 2022
Sep 15, 2022
and mid-December 2022
Minimum requirements and assessment criteria
50% of the possible exam points
Examination topics
see aims and topic of courseThe exam questions will probe your knowledge of the methods used in MD simulations. The will also be concerned with the setup of meaningful simulations systems which represent reality as much as possible.
Reading list
Additional background reading:1) Background on methodologyhttps://www.ccp5.ac.uk/sites/www.ccp5.ac.uk/files/DL_POLY/data/4.09/EoMD.v1.2.pdf(To the best of my knowledge the above PDF is in the public domain; I can make a local copy available)2) Setting up meaningful simulation systems:
http://charmm-gui.org/?doc=demo
http://charmm-gui.org/?doc=demo
Association in the course directory
TC-3, CHE II-7, MMBW-3, SHELL-Ergänzungsfach-Chemie, SHELL-Schwerpunkt-Chemie, CH-CBS-01, BC-CHE II-7
Last modified: Th 14.03.2024 09:26
3) Methods building upon MD, e.g., calculation of free energy differnces
4) Practical setup of simulations, from PDB file to simulation system