300177 VO Structural Bioinformatics II (2016S)

3.00 ECTS (2.00 SWS), SPL 30 - Biologie

Moodle

Details

Sprache: Englisch

Prüfungstermine

Lehrende

Oliviero Carugo

Termine (iCal) - nächster Termin ist mit N markiert

Vorbesprechung: 18.3.2016, 11.00 Uhr, SR/STB, Viennabiocenter 5,1030 Wien.

Included in the teaching program of the PhD program "Integrative Structural Biology", part of the Vienna Doctoral School.

Montag 30.05. 10:00 - 16:00 CCR03-Raum 1.113 Campus Vienna Biocenter, 1030 Wien
Dienstag 31.05. 10:00 - 16:00 CCR03-Raum 1.113 Campus Vienna Biocenter, 1030 Wien
Mittwoch 01.06. 10:00 - 16:00 CCR03-Raum 1.113 Campus Vienna Biocenter, 1030 Wien
Donnerstag 02.06. 10:00 - 16:00 CCR03-Raum 1.113 Campus Vienna Biocenter, 1030 Wien
Freitag 03.06. 10:00 - 16:00 CCR03-Raum 1.113 Campus Vienna Biocenter, 1030 Wien

Information

Ziele, Inhalte und Methode der Lehrveranstaltung

Analysis and prediction of protein structural features. Prediction of secondary structure, solvent exposure, and conformational disorder. Prediction of tertiary structure with ab initio methods, homology modelling techniques, and fold recognition approaches. Prediction of protein-protein interactions and of quaternary structures. Molecular mechanics and energy estimation and minimization. Introduction to molecular dynamics. Introduction to machine learning methods with predictive capabilities (artificial neural networks and support vector machines). Comparison and validation of predictive algorithms. Use of free and online software packages.

Art der Leistungskontrolle und erlaubte Hilfsmittel

Written exam

Mindestanforderungen und Beurteilungsmaßstab

Prüfungsstoff

Literatur

M. Michael Gromiha

Protein Bioinformatics - From Sequence to Function

Elsevier, Amsterdam, 2010

Zuordnung im Vorlesungsverzeichnis

MMB II-2, MMB W-2, MGE III-2, MMEI III, M-WZB

Letzte Änderung: Mi 13.12.2023 00:21