300217 PUE Exercises in Population Genetics (2023W)
Labels
VOR-ORT
An/Abmeldung
Hinweis: Ihr Anmeldezeitpunkt innerhalb der Frist hat keine Auswirkungen auf die Platzvergabe (kein "first come, first served").
Details
max. 14 Teilnehmer*innen
Sprache: Englisch
Lehrende
Termine
Exercises will take place Thursdays 1:30PM-4:30 PM, either at OMP1 or at VetMeduUni. Detailed schedule here:
https://docs.google.com/spreadsheets/d/1gpVd3o0UXc0KYon4MuMs2IG8juGWH4km3Fl3AcFkzAk/edit?usp=sharing
Information
Ziele, Inhalte und Methode der Lehrveranstaltung
Art der Leistungskontrolle und erlaubte Hilfsmittel
Combined exam for the whole module (lecture plus exercises)
Mindestanforderungen und Beurteilungsmaßstab
minimal requirement: good understanding of key concepts taught in the lecture and the exercises
Prüfungsstoff
content of lecture and exercises
Literatur
Suggested reading:
Hedrick, Genetics of Populations, Jones and Bartlett
Crawley, Statistics: An Introduction Using R, Wiley
Barrett, Linux Pocket Guide: Essential Commands, Reilly
Paradis, R for beginners (available online from CRAN)
Hedrick, Genetics of Populations, Jones and Bartlett
Crawley, Statistics: An Introduction Using R, Wiley
Barrett, Linux Pocket Guide: Essential Commands, Reilly
Paradis, R for beginners (available online from CRAN)
Zuordnung im Vorlesungsverzeichnis
MES 1
Letzte Änderung: Do 05.10.2023 15:48
Introduction to R and R graphics (ggplot2), Wright Fisher simulations, Coalescent simulations, application of neutrality tests, basic handling of NGS data, simulations of quantitative traitsPre-requisites: basic knowledge of R and of the UNIX command lineGoals:
Students are familiar with the R programming language and commonly used tools in population genetics (MS, PAML, alignment tools). The students are able to simulate neutral and selective processes in populations. They can apply widely used neutrality tests to genome scale data.