Universität Wien

300416 UE 3-D Imaging and Modeling Using MicroCT (2024W)

Microscopy and software methods for 3D morphological analysis

10.00 ECTS (6.00 SWS), SPL 30 - Biologie
Prüfungsimmanente Lehrveranstaltung
Moodle
Di 03.12. 13:30-15:00 Ort in u:find Details

An/Abmeldung

Hinweis: Ihr Anmeldezeitpunkt innerhalb der Frist hat keine Auswirkungen auf die Platzvergabe (kein "first come, first served").

Details

max. 8 Teilnehmer*innen
Sprache: Englisch

Lehrende

Termine (iCal) - nächster Termin ist mit N markiert

13:15 bis 14:45 Uhr (nicht 13:30-15h) dienstags im Meeting Room 5.121, UBB, OG 5, Djerassiplatz 1, 1030 Wien statt.

  • Dienstag 08.10. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 15.10. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 22.10. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 29.10. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 05.11. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 12.11. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 19.11. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 26.11. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 10.12. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 17.12. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 07.01. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 14.01. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 21.01. 13:30 - 15:00 Ort in u:find Details
  • Dienstag 28.01. 13:30 - 15:00 Ort in u:find Details

Information

Ziele, Inhalte und Methode der Lehrveranstaltung

Students will learn methods for image analysis using ImageJ, Amira, or other software as needed, and carry out projects using 3D images of biological samples from x-ray microtomography (microCT) or other sources. Projects are flexible: students may bring their own projects or work on and assigned one. Techniques can include applications of image processing and analysis software to 2D and 3D images, 3D image reconstruction and visualisation, and image measurement and analysis. Projects can be on organismal morphology (comparative, developmental, evolutionary), functional or structural analysis/modeling, image computing or informatics, or other topics according to student interests.
Weekly class meetings will cover theoretical and practical background and provide time for project design and execution. The course time is not blocked, so the project work can be carried out according each student's own schedule.
Course website: http://imagingclasses.blogspot.co.at/

Art der Leistungskontrolle und erlaubte Hilfsmittel

Based on participation (30%), project content and presentation (30%), and final report (40%).

Mindestanforderungen und Beurteilungsmaßstab

Students will carry out a small research project and present their results, while learning techniques and applications of 3D microscopic imaging. They will present their results to the class, and write a short research report in the format of a scientific paper.

Prüfungsstoff

In-class discussions, independent reading, and small-group work with instructors.

Literatur

Literature specific to each project will be chosen by the instructors and students during development of the projects.

Zuordnung im Vorlesungsverzeichnis

M-WZB, MZO2, MBO 7

Letzte Änderung: Fr 27.09.2024 08:46