Universität Wien

301185 VO Structural Bioinformatics I (2017W)

3.00 ECTS (2.00 SWS), SPL 30 - Biologie
Moodle

Details

Sprache: Englisch

Prüfungstermine

Lehrende

Termine

Preliminary meeting in the Seminar room (Dept. Structural and Computational Biology)

Friday, October 6, 2017, 12-13

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Lectures in the PC room (Dept. Structural and Computational Biology)

Monday, January 15, 2018, 10-12 and 13-17
Tuesday, January 16, 2018, 10-12 and 13-17
Wednesday, January 17, 2018, 10-12 and 13-17
Thursday, January 18. 2018, 10-12
Friday, January 19, 2018, 10-12 and 13-17

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Exams in Carugo’s office (Dept. Structural and Computational Biology)

Friday, February 2, 2018, 9.30
Friday, February 9, 2018, 9.30
Friday, March 2, 2018, 9.30
Friday, March 23, 2018, 9.30
Friday, April 13, 2018, 9.30
Friday, May 11, 2018, 9.30

Information

Ziele, Inhalte und Methode der Lehrveranstaltung

Programme Introduction to the molecular graphics and analysis of the most common protein folds with RasMol, Pymol and Chimera. Measurements of structural similarity between proteins, theory and applications (Dalilite, CE, PDBeFold and other tools). Databases of macromolecular structures: the Protein Data Bank, the wwPDB and the ePDB. Databases of structural domains: CATH, SCOP, and SCOP2. Databases of protein domains: Pfam, InterPro, InterProScan. Databases of computational models: ModBase and BioModels. Validation of experimental macromolecular structures. The problem of data redundancy.

Art der Leistungskontrolle und erlaubte Hilfsmittel

Schriftliche Abschlussprüfung

Mindestanforderungen und Beurteilungsmaßstab

Prüfungsstoff

Literatur

Zuordnung im Vorlesungsverzeichnis

MMB II-2, MMB W-2, MGE III-2, MMEI III, M-WZB, PhD MB 1,UF MA BU 01, UF MA BU 04

Letzte Änderung: Mo 07.09.2020 15:44