053531 PR Software development project in bioinformatics (2025W)
Continuous assessment of course work
Labels
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
- Registration is open from Fr 12.09.2025 09:00 to Mo 22.09.2025 09:00
- Deregistration possible until Tu 14.10.2025 23:59
Details
max. 25 participants
Language: English
Lecturers
- Heiko Andreas Schmidt
- Stefan Badelt
- Martin Chiettini
- Ivo Hofacker
- Jörg Menche
- Felix Müller
- Alexander Pfundner
- Shaul Pollak Pasternak
- Thomas Rattei
- Celine Sin
- Hua-Ting Yao
- Christiane Hütter
- Daniel Malzl
Classes (iCal) - next class is marked with N
The initial meeting (Vorbesprechung) on October 3rd will take place online.
The link to the BigBlueButton session will be available in Moodle.
- Friday 03.10. 14:00 - 16:00 Digital (Kickoff Class)
- Friday 10.10. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 17.10. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 24.10. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 31.10. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 07.11. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 14.11. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 21.11. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 28.11. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- N Friday 05.12. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 12.12. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 19.12. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 09.01. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 16.01. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 23.01. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 30.01. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 06.02. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 13.02. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
- Friday 20.02. 14:00 - 16:00 STB/Hörsaal A Campus Vienna Biocenter 5, 1030 Wien
Information
Aims, contents and method of the course
Assessment and permitted materials
During this course a software project will be created. The project as a whole has to be described in a project report (PDF). In that report the biological/technical background has to be introduced, the chosen approaches described and justified and the results and possible problems have to discussed. In addition, the developed software and its usage has to be documented.
Furthermore, the project (its background, approaches and aims) has to be explained in a presentation at the beginning of the semester as well as its results and details in a final presentation at the end, both in front of the course participants.
Furthermore, the project (its background, approaches and aims) has to be explained in a presentation at the beginning of the semester as well as its results and details in a final presentation at the end, both in front of the course participants.
Minimum requirements and assessment criteria
a. Minimum requirements: Successful initial and final presentation in front of the course participants; successful realization and implementation of the project; submission of project report (as PDF), code and documentation as archive (possibly plus data).
b. Assessment criteria: All parts enter the grading, i.e. project realization/implementation, project report, documentation and presentations.
b. Assessment criteria: All parts enter the grading, i.e. project realization/implementation, project report, documentation and presentations.
Examination topics
All content relevant to the specific projects.
Reading list
Will be announced during the course.
Association in the course directory
Module: BIOINF05
Last modified: Tu 16.09.2025 11:06
b. Content: Based on a current bioinformatics problem a software will be developed, implemented, evaluated and documented. The results will be presented to the course participants.
c. Methods: Presentations and discussion of the project and the chosen approaches; Independant working, implementating and documentation in exchange and discussion with a project advisor.
d. Prerequisites: Programming experience is required.