269020 VO Computational Concepts in Biology II (2020S)
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Examination dates
Lecturers
- Thomas Rattei
- Andras Aszodi
- Maria Filipa Baltazar de Lima de Sousa
- David Berry
- Christoph Flamm
- Craig Herbold
- Jörg Menche
- Wolfram Weckwerth
- Stefanie Widder
Classes (iCal) - next class is marked with N
11.3. Exact string matching (Thomas Rattei)
18.3. Self learning (No lecture)
25.3. Assembly graphs (Thomas Rattei)
1.4. Self learning (No lecture)
22.4. Self learning (No lecture)
29.4. 13-17 Biological networks I (Stefanie Widder and Christoph Flamm)
6.5. 13-17 Biological networks II (Stefanie Widder and Christoph Flamm)
13.5. Artificial life (Andras Aszodi)
20.5. Microbial Ecology I: PCR and Amplicons (Craig Herbold)
27.5. Microbial Ecology II: Computational concepts (David Berry)
3.6. Comparative Genomics (Filipa Sousa)
10.6. Networks in Biology and Medicine (Jörg Menche)
17.6. Multiomics and System Theory (Wolfram Weckwerth)
24.6. Exam (Rattei)
- Large-scale experimental methods
- Data management, reduction, normalization
- Methods for differential analysis and clustering
- Enrichment analysis and network-based analysisBiological networks
- Topological analysis
- Stoichiometric analysis (MFA, FBA)
- Rule-based modeling of combinatorial complex networks
- Differential equation based methods
- Process algebras and model-checkingOrganisms and ecosystems
- Genetics and metabolomics
- Systems biology of human diseases
- Dynamical modeling of organism development (including imaging)
- Environmental modeling (ecoenzymatic theories, stochiometry based theories)
- Information processing in biological systems