270070 VO Structure and Dynamics of Biopolymers (2008W)
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Vorbesprechung und Terminvereinbarung: Do, 2.10.2008, 10:00: Institut für Theoretische Chemie und Institut für Computergestützte Biologische Chemie, Währinger Strasse 17, 1090 Wien, Seminarraum (Erdgeschoss)
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Aims, contents and method of the course
Assessment and permitted materials
Minimum requirements and assessment criteria
Conveying principles of the modeling and simulation of structure and dynamics of biopolymers at different levels of abstraction
Examination topics
Reading list
A.R.Leach, Molecular Modelling
Lecture notes
Lecture notes
Association in the course directory
CHE II-7
Last modified: Fr 31.08.2018 08:55
mechanisms of structure formation. Two classes of biopolymer molecules will be treated extensively: proteins and nucleic acids.
Special emphasis is laid on basic mathematical and physical principles
and concepts.
Secondary and tertiary structure of proteins and nucleic acids.
Mathematical basics for description and computational treatment of
the tertiary structure of biomolecules.
Molecular modeling, basics and application of force fields.
Foundations and limitations of "implicit solvent" methods.
Analysis and interpretation of Molecular Dynamics simulations.
Computational methods based on RNA secondary structure and their application in the simulation of folding dynamics.
Grading: Oral exam