Universität Wien

270199 VO Bioinformatics II (2024S)

Computational Mass Spectrometry

2.00 ECTS (1.00 SWS), SPL 27 - Chemie
ON-SITE

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Details

Language: German

Lecturers

Classes (iCal) - next class is marked with N

The course starts at 9 am and ends at 10 am (60 min).

Thursday 07.03. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 14.03. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 21.03. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 11.04. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 18.04. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 25.04. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 02.05. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 23.05. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Monday 03.06. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 13.06. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 20.06. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42
Thursday 27.06. 08:00 - 10:00 Hörsaal 4 Chemie HP Währinger Straße 42

Information

Aims, contents and method of the course

In this course, the students will be introduced into basic bioinformatics concepts that arise from the challenges within the field of mass spectrometry with a focus on metabolomics, lipidomics, proteomics (MLP). After an introduction into mass spectrometry itself, the course will present a set of mechanism, methods, and computational necessities along with statistical approaches for data analysis and interpretation. This contains topics such as: peak picking, alignments, APIs, isotope correction, workflow systems, T-Tests with correction for multiple testing and statistical power, or database matching for identification.

Assessment and permitted materials

At the end of the lecture, the students need to pass a written exam. To successfully pass this course, the students need to obtain at least 50% of the points in the exam. Deception, or transcription of co-students is not tolerated and will be scored with 0 points.

Minimum requirements and assessment criteria

At least 50% of the maximum possible points must be achieved to obtain a positive grade. In total, 50 points can be achieved for this course from a written exam at the end of the course.
The grades are awarded according to the following scheme:
• 1 (very good): 50 – 45 points
• 2 (good): 44 – 39 points
• 3 (satisfactory): 38 – 32 points
• 4 (sufficient): 31 – 25 points
• 5 (insufficient): 24 – 0 points

Examination topics

At the end of the course, an oral exam will be conducted concerning the topics introduced during the lectures.

Reading list


Association in the course directory

CH-SAS-06

Last modified: Mo 13.05.2024 18:26