Universität Wien

300094 UE Proteomics in System Biology (2022S)

10.00 ECTS (6.00 SWS), SPL 30 - Biologie
Continuous assessment of course work
Moodle

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Details

max. 12 participants
Language: English

Lecturers

Classes (iCal) - next class is marked with N

Preliminary meeting March 1st at 10 am
via Zoom, link will be send.
attendance compulsory!
anticipated dates:
Theory online: Mach 14 and 15.
Lab work will take place March 16-18th.
Datamining: week of march 21th (depending on students, usually 3 days)
Final presentation of students week of March the 28th

  • Monday 14.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Tuesday 15.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Wednesday 16.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Thursday 17.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Friday 18.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Monday 21.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Tuesday 22.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Wednesday 23.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Thursday 24.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1
  • Friday 25.03. 09:00 - 19:00 Übungsraum 1.8 Molekularbiologie 2, Biologie Djerassiplatz 1, 1.040, Ebene 1

Information

Aims, contents and method of the course

The terms "proteome" and "metabolome" (entirety of all active proteins and metabolites in a cell or tissue) was coined 10 years ago in analogy to the "genome" (entirety of all genes). The proteome comprises the full suite of all proteins/enzymes in a cell or a tissue. Because of the diversity and dynamic of the proteome sophisticated bioanalytical methods, especially mass spectrometry, are needed. In the frame of the project the student should learn basics of the technology proteomics and a special mass spectrometric technique for the analysis of proteins (shotgun proteomics for identification and quantification). At the same time the course will impart knowledge about mass spectrometrie in modern biology.

Assessment and permitted materials

Attendance control, oral presentation of techniques and results (30%), participation in practical and discussions (30%), written group protocol (40%).

Minimum requirements and assessment criteria

english

Examination topics

Protein extraction,- digestion, -separation (HPLC and SDS-PAGE), Mass Spectrometry for protein ID and quantification, data mining

Reading list

Association in the course directory

BBO 9, BOE 12, MMB W-2, MMEI III, MBO 7, MEC-9, M-WZB, MES5

Last modified: Mo 23.01.2023 14:09