Universität Wien

300224 PP Genome analysis of prokaryotes (2011S)

Applied bioinformatics for the analysis of a genome sequence

10.00 ECTS (6.00 SWS), SPL 30 - Biologie
Continuous assessment of course work

Vorbesprechung am 1.06.2011 um 15 Uhr im Seminarraum 2.257, UZA I.
Praktikum vom 19.-30.9.2011 je 9-17 Uhr in einem Computerraum UZA2, Althanstr. 14

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Details

max. 15 participants
Language: German, English

Lecturers

Classes

Currently no class schedule is known.

Information

Aims, contents and method of the course

In this practical course the participants acquire the knowledge and expertise to annotate and analyze prokaryotic genome sequences. This includes gene prediction, prediction of protein functions and structures and comparative genome analyses. The analysis of complete, yet unpublished genome sequences in this practical course allows us to address recent scientific questions in microbiology and microbial ecology using genomic methodologies.

Assessment and permitted materials

Written report in the format of a publication.

Minimum requirements and assessment criteria

Understanding and application of important computational methods for the analysis of genome sequences; automatic large-scale application of programs using small, self-written scripts; interpretation of the results of computational analyses with regard to the corresponding organism.

Examination topics

Diverse computational methods for genome analysis, programming language Perl.
Work in small work groups (each group analyzes another genome sequence).

Reading list

Wird bei der Vorbesprechung bereitgestellt.

Association in the course directory

B-BOE 12, B-BOE 13, B-BMB 11B, B-BMG 12B, BMB 11B, BMG 10B, BOE 10, BOE 11, BOE 12, BMB 11A, BMG 10A

Last modified: Mo 07.09.2020 15:43