300311 VO Bioinformatics for the analysis of microbial genomes, metagenomes and metatranscriptomes (2021W)
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Details
Language: German
Examination dates
Tuesday
25.01.2022
11:30 - 13:00
Digital
Thursday
17.03.2022
16:30 - 18:00
Digital
Tuesday
03.05.2022
16:30 - 18:00
Digital
Thursday
09.06.2022
16:30 - 18:00
Digital
Thursday
07.07.2022
16:30 - 18:00
Digital
Lecturers
Classes (iCal) - next class is marked with N
Exam dates
25.01.2022 Online
March 2022, Online
May 2022, Online
June 2022, Online
Tuesday
05.10.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
12.10.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
19.10.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
09.11.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
16.11.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
23.11.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
30.11.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
07.12.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
14.12.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
11.01.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Tuesday
18.01.
11:30 - 13:00
Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
Information
Aims, contents and method of the course
This lecture provides an overview on bioinformatics methods for the analysis of prokaryotic genomes, metagenomes and metatranscriptomes. Both established methods and tools, e.g. for gene prediction or functional and structural classification of proteins, and newly developed methods, e.g. for inferring functions from genomic associations, will be explained and discussed. Practical exercises will demonstrate the application of selected software tools to typical problems.
Assessment and permitted materials
Written exam dates (open-book: all written/printed material may be used):
25.1.2022 11.30-13.00
March 2022, Biologie Djerassiplatz 1, Date and Room TBA
May 2022, Biologie Djerassiplatz 1, Date and Room TBA
June 2022, Biologie Djerassiplatz 1, Date and Room TBA
25.1.2022 11.30-13.00
March 2022, Biologie Djerassiplatz 1, Date and Room TBA
May 2022, Biologie Djerassiplatz 1, Date and Room TBA
June 2022, Biologie Djerassiplatz 1, Date and Room TBA
Minimum requirements and assessment criteria
Understanding typical problems in microbial genomics, metagenomics and metatranscriptomics. Application of bioinformatic methods for solving these problems and interpretation of the results in the biological context.Evaluation scale of written exam:
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
Examination topics
Presentation and discussion of selected topics. Lecture in German with english material. Homework exercises.
Reading list
Will be provided during the lecture on the elearning platform.
Association in the course directory
BOE 9, BAN 6, BBO 8, BMG 10, BMB 10, BPB 11, BZO 11, UF BU 10
Last modified: Th 14.09.2023 00:21