300311 VO Bioinformatics for the analysis of microbial genomes, metagenomes and metatranscriptomes (2022W)
Labels
ON-SITE
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Details
Language: German
Examination dates
- Tuesday 31.01.2023 11:30 - 13:00 Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
- Wednesday 01.03.2023 16:45 - 18:15 Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
- Friday 31.03.2023 15:00 - 16:30 Hörsaal 1, Biologie Djerassiplatz 1, 0.037, Ebene 0
- Friday 19.05.2023 15:00 - 16:30 Hörsaal 3, Biologie Djerassiplatz 1, 0.005, Ebene 0
Lecturers
Classes (iCal) - next class is marked with N
- Tuesday 04.10. 11:30 - 13:00 Digital
- Tuesday 11.10. 11:30 - 13:00 Digital
- Tuesday 18.10. 11:30 - 13:00 Digital
- Tuesday 25.10. 11:30 - 13:00 Digital
- Tuesday 08.11. 11:30 - 13:00 Digital
- Tuesday 15.11. 11:30 - 13:00 Digital
- Tuesday 22.11. 11:30 - 13:00 Digital
- Tuesday 29.11. 11:30 - 13:00 Digital
- Tuesday 06.12. 11:30 - 13:00 Digital
- Tuesday 13.12. 11:30 - 13:00 Digital
- Tuesday 10.01. 11:30 - 13:00 Digital
- Tuesday 17.01. 11:30 - 13:00 Digital
- Tuesday 24.01. 11:30 - 13:00 Digital
Information
Aims, contents and method of the course
This lecture provides an overview on bioinformatics methods for the analysis of prokaryotic genomes, metagenomes and metatranscriptomes. Both established methods and tools, e.g. for gene prediction or functional and structural classification of proteins, and newly developed methods, e.g. for inferring functions from genomic associations, will be explained and discussed. Practical exercises will demonstrate the application of selected software tools to typical problems.
Assessment and permitted materials
Written exam dates (open-book: all written/printed material may be used):
31.1.2023 11.30-13.00
March 2023, Biologie Djerassiplatz 1, Date and Room TBA
May 2023, Biologie Djerassiplatz 1, Date and Room TBA
June 2023, Biologie Djerassiplatz 1, Date and Room TBA
31.1.2023 11.30-13.00
March 2023, Biologie Djerassiplatz 1, Date and Room TBA
May 2023, Biologie Djerassiplatz 1, Date and Room TBA
June 2023, Biologie Djerassiplatz 1, Date and Room TBA
Minimum requirements and assessment criteria
Understanding typical problems in microbial genomics, metagenomics and metatranscriptomics. Application of bioinformatic methods for solving these problems and interpretation of the results in the biological context.Evaluation scale of written exam:
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
Examination topics
Presentation and discussion of selected topics. Lecture in German with english material. Homework exercises.
Reading list
Will be provided during the lecture on the elearning platform.
Association in the course directory
BOE 9, BAN 6, BBO 8, BMG 10, BMB 10, BPB 11, BZO 11, UF BU 10
Last modified: Th 11.05.2023 11:28