300362 UE Applied Data Analysis (2020S)
Continuous assessment of course work
Labels
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
- Registration is open from Th 06.02.2020 08:00 to Th 20.02.2020 18:00
- Deregistration possible until Th 30.04.2020 18:00
Details
max. 15 participants
Language: English
Lecturers
Classes (iCal) - next class is marked with N
Vorbesprechung/Preliminary meeting:
25.03.2020 um/at 13:30 Uhr im/in COSB Seminarraum
(Biozentrum Althanstraße 14, 1090 Wien)
The course is planned for 10 days total over the course of 4 weeks of half-day lecturing and supervised project work/discussion beginning around April 20th till mid May.
Wednesday
25.03.
13:30 - 14:30
COSB-Seminarraum
Monday
20.04.
09:00 - 17:00
COSB-Seminarraum
Tuesday
21.04.
09:00 - 12:00
Konferenzraum
Tuesday
21.04.
12:00 - 17:00
Übungsraum 2
Monday
27.04.
09:00 - 17:00
COSB-Seminarraum
Tuesday
28.04.
09:00 - 12:00
Konferenzraum
Tuesday
28.04.
12:00 - 17:00
Übungsraum 2
Thursday
30.04.
09:00 - 17:00
Übungsraum 2
Monday
04.05.
09:00 - 17:00
COSB-Seminarraum
Thursday
07.05.
09:00 - 17:00
Übungsraum 2
Monday
11.05.
09:00 - 17:00
COSB-Seminarraum
Tuesday
12.05.
09:00 - 12:00
Konferenzraum
Tuesday
12.05.
12:00 - 17:00
Übungsraum 2
Thursday
14.05.
09:00 - 17:00
Übungsraum 2
Information
Aims, contents and method of the course
In this course we will learn about modern high-throughput methodologies and get hands-on experience with new methods and real data. We will discuss sequencing technology, experiment design, quality control, read mapping and counting, differential expression analysis, expression profiles and principal components analysis.
Assessment and permitted materials
Exercises will be done throughout the course as a part of a collective analysis.
Minimum requirements and assessment criteria
Students are recommended but not required to take 300353 UE Applied programming for Bioinformatics, or have a basic grounding in Unix and BASH shell scripting.
There are 10 days of the course. Presence on at least 8 days is required. The grade will be based on course participation (20%) and the final report in a form of a scientific paper outlining the aims and analyses completed during the course, as well as potential future directions (80%).
There are 10 days of the course. Presence on at least 8 days is required. The grade will be based on course participation (20%) and the final report in a form of a scientific paper outlining the aims and analyses completed during the course, as well as potential future directions (80%).
Examination topics
A final report describing the methods used as well as an analysis of the data will be required after completion of the course. Attendance and participation are also graded.
Reading list
Association in the course directory
MES6, MMEI III, MGE III-2, MMB W-2, MMB W-3, M-WZB
Last modified: Sa 22.10.2022 00:30