Universität Wien FIND

Due to the COVID-19 pandemic, changes to courses and exams may be necessary at short notice (e.g. cancellation of on-site teaching and conversion to online exams). Register for courses/exams via u:space, find out about the current status on u:find and on the moodle learning platform.

Further information about on-site teaching and access tests can be found at https://studieren.univie.ac.at/en/info.

Warning! The directory is not yet complete and will be amended until the beginning of the term.

301214 UE Toolkit for in silico sequence analysis (2021S)

forma UE IIIB

3.00 ECTS (2.00 SWS), SPL 30 - Biologie
Continuous assessment of course work
MIXED

Summary

1 Eislmayr , Moodle
2 Kovarik , Moodle

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Registration information is available for each group.

Groups

Group 1

max. 18 participants
Language: English
LMS: Moodle

Lecturers

Classes

see german version

Group 2

max. 18 participants
Language: English
LMS: Moodle

Lecturers

Classes

see german version


Information

Aims, contents and method of the course

Aims: Acquirement of skills for the use of databases for genome, DNA, RNA and protein sequences. Ability to analyze these sequences for solving basic questions in the molecular biology research.
Content: Search and retrieval of sequences; homology analysis and sequence comparison; identification of protein domains using multiple sequence alignment; in silico plasmid cloning, design of CRIPSR/Cas9-mediated genome editing; primer design for qPCR and PCR; analysis of qPCR data; protein structures
Methods: Practical work on computer

Assessment and permitted materials

Type of assessment, the following aspects are evaluated: active participation in the course, results of daily tasks, written report, final exam.
Permittet material: own notes, own protocol, computer, internet

Minimum requirements and assessment criteria

Minimum requirements for passing the course: Attendance, submission of the protocol, final exam (each of the evaluated parts must be completed with a positive grade).
Assessment criteria: active participation 25%, protocol 25%, final exam 50%

Examination topics

Contents of course units.

Reading list

Descriptions and references to original publications on the web pages of the databases and web-based services.

Association in the course directory

MMB I-2, MMB II-2, MMB III-2, MMB W-2, MGE III-1, MGE III-2, MMEI III

Last modified: We 21.04.2021 11:27