301232 VO Computational Structural Biology (2022S)
Labels
REMOTE
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Details
Language: English
Examination dates
Lecturers
Classes
28.3.22 - 8.4.22, blocked, every day 9.00 -12.00 Uhr (online)
Zoom Link for lectures:https://univienna.zoom.us/j/64796639207?pwd=NnErcmplRXdiK1RKeGlsNUN2eXB0dz09Meeting ID: 647 9663 9207
Passcode: 955265
Information
Aims, contents and method of the course
Computational methods have become an indispensible part of modern structural biology and biophysics research. In this course, we will introduce the fundamentals of modeling of biological structures and their dynamics at the level of individual molecules and with the aid of physico-chemically realistic models. Topics include: principles of molecular dynamics and Monte Carlo simulations of biomolecules, development and application of force fields, treatment of solvent and electrostatics, computational techniques for the refinement of biomolecular structures, free-energy calculations and protein structure prediction
Assessment and permitted materials
Written exam
Minimum requirements and assessment criteria
a. Minimum requirements: at least 50% success; b.Assessment criteria: Performance on the oral exam - 1 (excellent)|90-100%; 2 (good): 75-89.99%; 3 (satisfactory): 60-74.99%; 4 (sufficient): 50-59.99%; 5 (insufficient): 0-49.99%
Examination topics
Contents of the lectures as given in the handouts and lecture notes.
Reading list
Dan Frenkel and Berend Smit: Understanding Molecular Simulation, ISBN ISBN: 9780122673511; Andrew Leach: Molecular Modeling, ISBN-13: 978-0582382107
Association in the course directory
MMB I-3, MMB I-4, MMB II-3, MMB II-4, MMEI III, PhD MB 1, PhD MB 2
Last modified: Tu 24.05.2022 10:50