Universität Wien FIND

301590 VU Fundamental Bioinformatics (2019W)

5.00 ECTS (3.00 SWS), SPL 30 - Biologie
Continuous assessment of course work

Registration/Deregistration

Details

max. 150 participants
Language: German

Lecturers

Classes (iCal) - next class is marked with N

Termin: jew. Mo. von 9.45-13.00 Uhr
Ort: HS 3/UZA II Geozentrum, Althanstraße 14, 1090 Wien.
Siehe auch Studentenseite der Departments:
http://molekularebiologie.univie.ac.at/
Voraussetzungen sind: 301628 Vo Mathematik und die 301629 UE Mathematik

Monday 07.10. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 14.10. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 21.10. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 28.10. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 04.11. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 11.11. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 18.11. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 25.11. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 02.12. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 09.12. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 13.01. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 20.01. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum
Monday 27.01. 09:45 - 13:00 Hörsaal 3 2A211 2.OG UZA II Geo-Zentrum

Information

Aims, contents and method of the course

Introduction to basic bioinformatical algorithms, in particular sequence
analysis methods.
sequence similarity; dynamic programming; alignment algorithms
(Needleman-Wunsch, Smith-Waterman, Gotoh, BLAST and FASTA);
multiple alignments; clustering and phylogeny reconstruction; RNA secondary
structures.
Course material: Lecture notes
Grading: Home assignments and tests

Assessment and permitted materials

Home assignments and tests

Minimum requirements and assessment criteria

Understanding basic algorithms for sequence analysis as well as selected
advanced algorithms.

Examination topics

Reading list


Association in the course directory

BMB 7, BMG 7, BAN 6, BBO 8, BOE 11, BPB 11, BZO 11

Last modified: Fr 11.10.2019 11:28