Universität Wien
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301590 VU Fundamental Bioinformatics (2022W)

5.00 ECTS (3.00 SWS), SPL 30 - Biologie
Continuous assessment of course work
ON-SITE

Registration/Deregistration

Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).

Details

max. 130 participants
Language: German

Lecturers

Classes (iCal) - next class is marked with N

see german version

Monday 10.10. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 17.10. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 24.10. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 31.10. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 07.11. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 14.11. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 21.11. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 28.11. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 05.12. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 12.12. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 09.01. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 16.01. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 23.01. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum
Monday 30.01. 08:00 - 11:15 Hörsaal 2 Eduard Suess, 2A122 1.OG UZA II Geo-Zentrum

Information

Aims, contents and method of the course

Introduction to basic bioinformatical algorithms, in particular sequence
analysis methods.
sequence similarity; dynamic programming; alignment algorithms
(Needleman-Wunsch, Smith-Waterman, Gotoh, BLAST and FASTA);
multiple alignments; clustering and phylogeny reconstruction; RNA secondary
structures.
Course material: Lecture notes
Grading: Home assignments and tests

Assessment and permitted materials

Home assignments and 2 written tests
Permitted materials for tests: Calculator

Minimum requirements and assessment criteria

Understanding basic algorithms for sequence analysis as well as selected
algorithms for phylogeny reconstruction and structure prediction.
Assessment: Weighted average of grades on home assignments and tests

Examination topics

Content of lectures and slides

Reading list


Association in the course directory

BMB 7, BMG 7

Last modified: Fr 30.09.2022 11:50