300353 UE Applied programming for Bioinformatics (2021W)
Principles and techniques for simple programming to solve biological problems, using a common programming language. Practical experience with text processing and automation of external programms.
Prüfungsimmanente Lehrveranstaltung
Labels
DIGITAL
An/Abmeldung
Hinweis: Ihr Anmeldezeitpunkt innerhalb der Frist hat keine Auswirkungen auf die Platzvergabe (kein "first come, first served").
- Anmeldung von Do 09.09.2021 08:00 bis Do 23.09.2021 18:00
- Abmeldung bis So 31.10.2021 18:00
Details
max. 25 Teilnehmer*innen
Sprache: Englisch
Lehrende
Termine (iCal) - nächster Termin ist mit N markiert
Vorbesprechung am 7.10.2021,
Hybrid Format:
Anwesenheit: 13:15 Uhr, Seminarraum 1.7, Biologie Djerassiplatz 1
Online: Zoom link per e-mail
Die Uebung wird dann voraussichtlich jeweils Donnerstag Vormittag sein.
Donnerstag
07.10.
13:15 - 16:30
Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
Information
Ziele, Inhalte und Methode der Lehrveranstaltung
Orientation in programming languages and how to set up a programming environment. Programming basics: data types, assignments, flow control, functions and procedures, debugging. Sorting and searching. Finding and using existing programming libraries. Automating external programmes and web services, and parsing results. Object orientation.
Art der Leistungskontrolle und erlaubte Hilfsmittel
Solutions to exercises are handed in weekly, and grading is based on the completion of exercises and the final project.
Mindestanforderungen und Beurteilungsmaßstab
After the course, the students will know principles and techniques for construction of simple programs to computationally analyse biological data, using a common scripting programming language. The participants will have practical experience with implementation of text processing and parsing as well as communication with external programs from within a common scripting programming language. The method of work at the course will also train the participants to plan and complete projects.
Prüfungsstoff
The course will be in the form of short lectures, followed by longer individual exercises. A larger applied exercise/project is given at the end of the course.
Literatur
Zuordnung im Vorlesungsverzeichnis
M-WZB, MMB W-2, MMB W-3, MGE III-2,
Letzte Änderung: Di 24.01.2023 00:26